Installation¶
This is the guideline to setup the pipeline in any workstation or HPC environment. The full python package can be installed using pip.
Important
Required python version 3.10. Other versions may work, but not tested. Hence, recommend to use python 3.10.
Tip
To make life easier, both the Python and other dependencies can be installed using conda. First, ensure you have conda installed, or follow the steps below to install it.
Load installed conda module in HPC cluster¶
In many HPC clusters, conda may be installed already. In that case, it is recommended to read HPC cluster document and check how to load conda. In general, it can be loaded using the module to function. Load it as:
module load anaconda3
module load miniconda3
Note
Loading conda could be different in different HPC. We strongly suggest to check documentation and guideline from HPC system administrator how to load conda, if it is installed already.
Otherwise, install it following the steps below.